This Open Access textbook provides students and researchers in the life sciences with essential practical information on how to quantitatively analyze data images. It refrains from focusing on theory, and instead uses practical examples and step-by step protocols to familiarize readers with the most commonly used image processing and analysis platforms such as ImageJ, MatLab and Python. Besides gaining knowhow on algorithm usage, readers will learn how to create an analysis pipeline by scripting language; these skills are important in order to document reproducible image analysis workflows.

The textbook is chiefly intended for advanced undergraduates in the life sciences and biomedicine without a theoretical background in data analysis, as well as for postdocs, staff scientists and faculty members who need to perform regular quantitative analyses of microscopy images.


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Workflows and Components of Bioimage Analysis.- Measurements of Intensity Dynamics at the Periphery of the Nucleus.- 3D Quantitative Colocalisation Analysis.- The NEMO Dots Assembly: Single-Particle Tracking and Analysis.- Introduction to MATLAB: Image Analysis & Brownian Motion.- Resolving the process of Clathrin Mediated Endocytosis Using Correlative Light & Electron Microscopy (CLEM).


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This Open Access textbook provides students and researchers in the life sciences with essential practical information on how to quantitatively analyze data images. It refrains from focusing on theory, and instead uses practical examples and step-by step protocols to familiarize readers with the most commonly used image processing and analysis platforms such as ImageJ, MatLab and Python. Besides gaining knowhow on algorithm usage, readers will learn how to create an analysis pipeline by scripting language; these skills are important in order to document reproducible image analysis workflows.

The textbook is chiefly intended for advanced undergraduates in the life sciences and biomedicine without a theoretical background in data analysis, as well as for postdocs, staff scientists and faculty members who need to perform regular quantitative analyses of microscopy images.


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Wins readers over with its highly practical approach, instead of using too much theory Provides non-experts with the know-how to perform image analyses on their own A valuable asset for diverse groups in the life sciences and biomedicine
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GPSR Compliance The European Union's (EU) General Product Safety Regulation (GPSR) is a set of rules that requires consumer products to be safe and our obligations to ensure this. If you have any concerns about our products you can contact us on ProductSafety@springernature.com. In case Publisher is established outside the EU, the EU authorized representative is: Springer Nature Customer Service Center GmbH Europaplatz 3 69115 Heidelberg, Germany ProductSafety@springernature.com
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Open Access This book is licensed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license and indicate if changes were made. The images or other third party material in this book are included in the book's Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the book's Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder.
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Produktdetaljer

ISBN
9783030223854
Publisert
2019-10-30
Utgiver
Springer Nature Switzerland AG; Springer Nature Switzerland AG
Høyde
240 mm
Bredde
168 mm
Aldersnivå
Graduate, P, 06
Språk
Product language
Engelsk
Format
Product format
Heftet

Om bidragsyterne

Dr. Kota Miura is a Bioimage Data Analyst and works with various research groups at the EMBL in Heidelberg, Germany. He is also Vice Chair of NEUBIAS (the Network of European Bioimage Analysts).

 

Natasa Sladoje is an Associate Professor at the Centre for Image Analysis, Department of Information Technology at Uppsala University in Sweden and a Professor at the Faculty of Technical Sciences, University of Novi Sad, in Serbia. She is also an Associate Research Professor at the Mathematical Institute of the Serbian Academy of Sciences and Arts.